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Added 16 days ago
S
GIS Technician
SYSTRA
Toronto, ON
- Full-time
Assist GIS Specialists with spatial analysis, application development, testing, automation, and technical investigations.
Added 16 days ago
S
GIS Manager
SYSTRA
Toronto, ON
- Full-time
Data & Automation: Python, ArcPy, Arcade, FME / FME Flow
Added 16 days ago
Network Solution Architect
Mariner
NB
Hands-on experience with Python, Ansible, Terraform, or Bicep.
Added 16 days ago
Network Solution Architect
Mariner
NB · NS
Hands-on experience with Python, Ansible, Terraform, or Bicep.
Added 16 days ago
CO
DevOps Engineer
Caspian One
Toronto, ON
- $80 to $110 CAD / hour
- Contract
(The team are working exclusively with Caspian One to build out this team)
Added 16 days ago
UT
Senior ASIC RTL Design Engineer
USA Tech Recruit
Ottawa, ON
- $150,000 to $200,000 CAD / year
- Full-time
Scripting experience with Python, Tcl, or similar languages for design-flow automation.
Added 17 days ago
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Audio/Edge AI Silicon Validation and Firmware Engineer
Qualcomm
Markham, ON
- Full-time
Interact with multiple engineering teams (Digital and mixed signal design and verification, HW architecture, SW/FW), across different geographies to debug, isolate and resolve SW and…
Added 16 days ago
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Search Engineer
Mendable
Toronto, ON
- $235,000 to $260,000 USD / year
- Full-time
…accessing pages at web scale, and the modern web actively resists automation with detection systems, challenge flows, and fingerprinting that evolve weekly. This role is equal parts…
Added 17 days ago
RB
2027 Investor Services, PEY Securities Lending Desk (12-16 months)
Royal Bank of Canada
Toronto, ON
- Full-time
…supporting the Desk who is responsible for market execution with borrowers, maximizing profitability within existing products, and identifying revenue opportunities for our lending clients,…
Added 16 days ago
SE
Senior, Systems Development
Schneider Electric
Richmond, BC
- $114,750 to $162,000 CAD / year
- Full-time
Familiarity with communication protocols such as CAN, Modbus, or Ethernet, and with programming or scripting languages such as Python or C.
Added 17 days ago
Risk Observability & Analytics Engineer
Capgemini
Montreal, QC
Leverage AI Intelligence to optimize architecture and improve automation.
Added 17 days ago
C
Senior Fullstack Engineer, Agentic Experience
CreatorIQ
Remote, Canada
- $132,000 to $165,000 CAD / year
- Full-time
- Remote
Backend & API Expertise: You are proficient in Node.js and Python, with a strong background in building reliable APIs and integrating data connectors.
Added 16 days ago
O
Staff Machine Learning Engineer, SecureAI
Okta
Toronto, ON
- $168,000 to $231,000 CAD / year
- Full-time
8+ years of software development experience, with strong programming expertise in Python (and familiarity with Go or Typescript a plus).
Added 16 days ago
Staff Machine Learning Engineer, SecureAI
Okta
Toronto, ON
8+ years of software development experience, with strong programming expertise in Python (and familiarity with Go or Typescript a plus).
Added 17 days ago
C
Pluggable Optical Modems Test Engineer
Ciena
Ottawa, ON
- Full-time
…high-performance optical communications. The position works closely with engineering teams to execute testing, investigate issues, and improve automation capabilities. Success in this role…
Added 17 days ago
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Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Ottawa, ON · Kanata, Ontario
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Montreal, QC
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Toronto, ON
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Ottawa, ON
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Montreal, QC · Saint-Laurent, QC
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Software Developer Embedded Systems I (Co-op) - Canada
Cisco
Calgary, AB
- Full-time
As an Embedded Systems Software Developer Co-op, you will contribute to the design, enhancement, and testing of foundational software powering Cisco’s networking platforms and intelligent…
Added 16 days ago
C
Leader, Business Intelligence
Cisco
Toronto, ON
- Full-time
Python or R for statistical analysis and automation.
Added 16 days ago
BC
Assistant Instructor, Mechanical Engineering
British Columbia Institute of Technology
Burnaby, BC
- $72,334 to $98,815 CAD / year
- Full-time
…Instructor who is an enthusiastic, team-oriented professional with broad practical knowledge of mechanical engineering…
Added 16 days ago
PI
Research Software Engineer
ProteinQure Inc
Toronto, ON
- $120,000 to $150,000 CAD / year
…treatments for cancer and other indications while also partnering with industry leaders in drug discovery to generate novel therapeutics outside of the conventional chemical…
Added 16 days ago
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Python Developer
SPECTRAFORCE
Toronto, ON
- $75 to $80 CAD / hour
- Contract
2.) 5+ years of strong professional experience with Python, specifically FastAPI.

ProteinQure Inc

Research Software Engineer

Toronto, ON, Canada

$120,000 to $150,000 CAD / year

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Job details

Pay: $120,000 to $150,000 CAD / year
Experience: 3-5 years of software development experience
Posting language: English
Posted: Sep 16, 2026

Original job description

About ProteinQure

At ProteinQure, we have built the best computational platform for peptides that target extracellular targets. Our mission is to help to create a world where drugs are engineered, not discovered. We work on treatments for cancer and other indications while also partnering with industry leaders in drug discovery to generate novel therapeutics outside of the conventional chemical space.

Our technology combines computational biophysical models with statistical and machine learning approaches to enable us to search across vast spaces of protein therapeutics. We have worked with three of the top 25 pharma companies and have validated our tools on multiple targets.

We also have multiple internal programs, the most advanced being a First-in-Class peptide drug conjugate for TNBC, which is in a Phase 1 clinical trial including the best sites in North America. A second clinical program is expected within 3 years. Our other internal programs focus on using peptides as delivery vehicles for therapeutic payloads such as radioisotopes and siRNA.

Position: Research Software Engineer

Reports to: Head of Engineering

Status: Permanent

Expected Compensation Range: $120,000 to $150,000 CAD annually, based on skills, qualifications, and relevant experience.

The Research Software Engineer is responsible for developing, maintaining, and supporting the software tools and computational workflows that enable ProteinQure’s drug discovery research. Working closely with scientists and engineers, they translate research needs into reliable, reproducible software, troubleshoot technical issues, and improve the performance and usability of the computational platform. The role combines hands-on software development with technical support for scientific users, along with ownership of scoped projects and contributions to testing, documentation, and shared engineering practices.

This job posting is to fill a new position. Artificial intelligence may be used to assist in the initial screening of resumes for this position. This process is supervised by a human, and hiring decisions are not made solely by artificial intelligence.

Key responsibilities include:

Development, maintenance, and support for scientific computational workflows.
Development of computational tools for protein property prediction and optimization
Scoping computational resource requirements for internal and external research projects
Collection of product requirements from scientists and translation into technical specifications
Supporting development of machine learning models
Participating in code reviews and shared engineering practices; taking ownership of scoped improvements from requirements through deployment and ongoing support.

Required Knowledge, skills and abilities

3-5 years of software development experience
Proficiency in Python and experience maintaining software used by others, including debugging, testing, and dependency management.
Experience using AI-assisted development tools, with independent review, testing, and validation of generated code and appropriate handling of confidential information.
Familiarity with Linux environments, shell scripting, and troubleshooting software execution issues.
Ability to prioritize development tasks alongside support requests, communicate tradeoffs, and recognize when to seek guidance.
[Nice-to-have] Devops experience. Kubernetes experience. Experience with computer hardware / on-prem servers.
[Nice-to-have] Experience in cell, molecular or protein biology.
Excellent English communications skills, both verbal and written
Legally able to work in Canada

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More about this job

Responsibilities

The Research Software Engineer will develop, maintain, and support computational workflows and software tools for drug discovery research. They will collaborate with scientists to translate research needs into technical specifications and ensure the reliability and performance of the computational platform.

Requirements

Candidates must have 3-5 years of software development experience with proficiency in Python and Linux environments. Familiarity with AI-assisted development tools and experience in scientific or computational research settings is highly valued.

Skills

Python
Software Development
Linux
Shell Scripting
Debugging
Testing
Dependency Management
Machine Learning
Computational Biology
Protein Engineering
Workflow Automation
Technical Documentation
Code Review
Devops
Kubernetes

Visa sponsorship

Not detected in the job text

Keywords

Research Software Engineer
Python
Computational Biology
Drug Discovery
Machine Learning
Linux
Shell Scripting
Devops
Kubernetes
Protein Therapeutics
Biophysical Models
Software Development
Workflow Automation
Debugging
Testing
Dependency Management
Technical Specifications
Code Review
Peptide Drug Conjugate
Molecular Biology
Cell Biology
Computational Platform
Data Analysis
Software Engineering
Biotechnology

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